genetics

Evolutionary and Phenotypic Characterization of Two Spike Mutations in European Lineage 20E of SARS-CoV-2
We have detected two mutations in the spike protein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) at amino acid positions 1163 and 1167 that appeared independently in multiple transmission clusters and different genetic backgrounds.They generate a whole new cluster inside 20E.
Paula Ruiz-Rodriguez, Clara Francés-Gómez, Álvaro Chiner-Oms, Mariana G. López, Santiago Jiménez-Serrano, Irving Cancino-Muñoz, Paula Ruiz-Hueso, Manuela Torres-Puente, María Alma Bracho, Giuseppe D’Auria, Llúcia Martinez-Priego, Manuel Guerreiro, Marta Montero-Alonso, María Dolores Gómez, José Luis Piñana, SeqCOVID-SPAIN Consortium, Fernando González-Candelas, Iñaki Comas, Alberto Marina, Ron Geller, and Mireia Coscolla
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Evolutionary and Phenotypic Characterization of Two Spike Mutations in European Lineage 20E of SARS-CoV-2
Persistent SARS-CoV-2 infection with repeated clinical recurrence in a patient with common variable immunodeficiency
We have analyzed the genetic diversity of the SARS-CoV-2 population in an immunocompromised patient with long covid.
Marta Dafne Cabañero-Navalon, Víctor García-Bustos, Paula Ruiz-Rodriguez, Iñaki Comas, Mireia Coscollá, Llúcia Martinez-Priego, José Todolí, Pedro Moral Moral
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Persistent SARS-CoV-2 infection with repeated clinical recurrence in a patient with common variable immunodeficiency
The first wave of the COVID-19 epidemic in Spain was associated with early introductions and fast spread of a dominating genetic variant
We have analyzed the genetic diversity of the SARS-CoV-2 in the First wave of the COVID-19 epidemic in Spain.
Mariana G. López, Álvaro Chiner-Oms, Darío García de Viedma, Paula Ruiz-Rodriguez, María Alma Bracho, Irving Cancino-Muñoz, Giuseppe D’Auria, Griselda De Marco, Neris García-González, Galo Adrian Goig, Inmaculada Gomez-Navarro, Santiago Jiménez-Serrano, Llúcia Martinez-Priego, Paula Ruiz-Hueso, Lidia Ruiz-Roldán, Manuela Torres-Puente, SeqCOVID consortium, Mireia Coscollá, Fernando González-Candelas, and Iñaki Comas
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The first wave of the COVID-19 epidemic in Spain was associated with early introductions and fast spread of a dominating genetic variant
Spread of a SARS-CoV-2 variant through Europe in the summer of 2020
We described a new Lineage of SARS-CoV-2, 20E lineage.
Emma B. Hodcroft, Moira Zuber, Sarah Nadeau, Timothy G. Vaughan, Katharine H. D. Crawford, Christian L. Althaus, Martina L. Reichmuth, John E. Bowen, Alexandra C. Walls, Davide Corti, Jesse D. Bloom, David Veesler, David Mateo, Alberto Hernando, Iñaki Comas, Fernando González-Candelas, Galo Adrian Goig, Álvaro Chiner-Oms, Irving Cancino-Muñoz, Mariana Gabriela López, Manuela Torres-Puente, Inmaculada Gomez-Navarro, Santiago Jiménez-Serrano, Lidia Ruiz-Roldán, María Alma Bracho, Neris García-González, Llúcia Martinez-Priego, Inmaculada Galán-Vendrell, Paula Ruiz-Hueso, Griselda De Marco, Maria Loreto Ferrús, Sandra Carbó-Ramírez, Giuseppe D’Auria, Mireia Coscollá, Paula Ruiz-Rodriguez, SeqCOVID consortium, Tanja Stadler, and Richard A. Neher
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Spread of a SARS-CoV-2 variant through Europe in the summer of 2020
Phylogenomics of Mycobacterium africanum reveals a new lineage and a complex evolutionary history
We described a new Lineage of Mycobacterium tuberculosis, closely related to L6.
Mireia Coscollá, Sebastien Gagneux, Fabrizio Menardo, Chloé Loiseau, Paula Ruiz-Rodriguez, Sonia Borrell, Isaac Darko Otchere, Adwoa Asante-Poku, Prince Asare, Leonor Sánchez-Busó, Florian Gehre, C. N'Dira Sanoussi, Martin Antonio, Dissou Affolabi, Janet Fyfe, Patrick Beckert, Stefan Niemann, Abraham S. Alabi, Martin P. Grobusch, Robin Kobbe, Julian Parkhill, Christian Beisel, Lukas Fenner, Erik C. Bottger, Conor J. Meehan, Simon R. Harris, Bouke C. de Jong, Dorothy Yeboah-Manu, and Daniela Brites
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Phylogenomics of Mycobacterium africanum reveals a new lineage and a complex evolutionary history